BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB008A04LP1|AL425789
(786 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1648 1437 0.0
>3x_Contig1648
Length = 16375
Score = 1437 bits (725), Expect = 0.0
Identities = 744/748 (99%), Gaps = 2/748 (0%)
Strand = Plus / Minus
Query: 41 ttcttcgttcgtgaaatcgtcgaagtaacctacatcttcttcgttatctagttgtgggat 100
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16375 ttcttcgttcgtgaaatcgtcgaagtaacctacatcttcttcgttatctagttgtgggat 16316
Query: 101 gaaaggtggatgaattgtccttagagtattgaaatcgatttcagagaagtatctcattct 160
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16315 gaaaggtggatgaattgtccttagagtattgaaatcgatttcagagaagtatctcattct 16256
Query: 161 cttcacatgttcgaaggattttaatctattaattgggtcagctatcaaacgtgttattag 220
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16255 cttcacatgttcgaaggattttaatctattaattgggtcagctatcaaacgtgttattag 16196
Query: 221 ttcccaagttctatctgagaacgcgtatctaccattatcacacttagg-tctttg-taac 278
|||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||
Sbjct: 16195 ttcccaagttctatctgagaacgcgtatctaccattatcacacttaggctctttgctaac 16136
Query: 279 acatgtttccagtttctcaagttttcataagtttcgtttgtgctatttccactgaagggt 338
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16135 acatgtttccagtttctcaagttttcataagtttcgtttgtgctatttccactgaagggt 16076
Query: 339 gtataacccactaaactttcgaaaagaatacatcccagggaccaataatcgaccgtgaaa 398
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16075 gtataacccactaaactttcgaaaagaatacatcccagggaccaataatcgaccgtgaaa 16016
Query: 399 tcgtaattcttggcttcaagaacttctaatgccatgtaatcgggcgaaccgacagttgag 458
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16015 tcgtaattcttggcttcaagaacttctaatgccatgtaatcgggcgaaccgacagttgag 15956
Query: 459 tgtgcgtntctaacttcctcttctctcagcttgttgtacattcttcttctgtcatccatc 518
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15955 tgtgcgtatctaacttcctcttctctcagcttgttgtacattcttcttctgtcatccatc 15896
Query: 519 gatctttctctaaactctgggaactctaaattcttaacctcttgtaatctgatcttcata 578
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15895 gatctttctctaaactctgggaactctaaattcttaacctcttgtaatctgatcttcata 15836
Query: 579 ctttcgattctttccattgatacggtaccggaagctaatccgaaatcagttaacttgata 638
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15835 ctttcgattctttccattgatacggtaccggaagctaatccgaaatcagttaacttgata 15776
Query: 639 tgtccctttgaatcaattaaaaagttttctggttttaaatctctgtgggtgtaaccaaat 698
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 15775 tgtccctttgaatcaattaaaaagttttctggttttaaatctctgtgggtgtaacccaat 15716
Query: 699 tgatgcaacgcgtttacagcgcagaacatctcactgatgtaaaacctggcatgtggggcc 758
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15715 tgatgcaacgcgtttacagcgcagaacatctcactgatgtaaaacctggcatgtggggcc 15656
Query: 759 tgtaagaattttgtattgagcagtaacg 786
||||||||||||||||||||||||||||
Sbjct: 15655 tgtaagaattttgtattgagcagtaacg 15628
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5957
Number of Sequences: 1807
Number of extensions: 5957
Number of successful extensions: 54
Number of sequences better than 1.0e-20: 1
length of query: 786
length of database: 10,358,551
effective HSP length: 16
effective length of query: 770
effective length of database: 10,329,639
effective search space: 7953822030
effective search space used: 7953822030
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)